OpenBioLink: A benchmarking framework for large-scale biomedical link
prediction

OpenBioLink: A benchmarking framework for large-scale biomedical link prediction

10 December 2019

Matthias Samwald

Papers citing "OpenBioLink: A benchmarking framework for large-scale biomedical link prediction"

10 / 10 papers shown

Title
MARS: A neurosymbolic approach for interpretable drug discovery L. Delong Yojana Gadiya Paola Galdi Jacques D. Fleuriot Daniel Domingo-Fernández 236 2 0 02 Oct 2024
TWIG: Towards pre-hoc Hyperparameter Optimisation and Cross-Graph Generalisation via Simulated KGE Models J. Sardina John D. Kelleher Declan O’Sullivan 33 0 0 08 Feb 2024
Clinical Trial Recommendations Using Semantics-Based Inductive Inference and Knowledge Graph Embeddings M. Devarakonda Smita Mohanty Raja Rao Sunkishala Nag Mallampalli Xiong Liu 29 4 0 27 Sep 2023
Knowledge-augmented Graph Machine Learning for Drug Discovery: A Survey from Precision to Interpretability Zhiqiang Zhong A. Barkova Davide Mottin 29 8 0 16 Feb 2023
A Survey of Knowledge Graph Reasoning on Graph Types: Static, Dynamic, and Multimodal K. Liang Lingyuan Meng Meng Liu Yue Liu Wenxuan Tu Siwei Wang Sihang Zhou Xinwang Liu Fu Sun LRM 36 110 0 12 Dec 2022
Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs Stephen Bonner Ufuk Kirik Ola Engkvist Jian Tang Ian P Barrett 30 19 0 13 Dec 2021
Prediction of Adverse Biological Effects of Chemicals Using Knowledge Graph Embeddings E. B. Myklebust Ernesto Jiménez-Ruiz Jiaoyan Chen Raoul Wolf K. Tollefsen 20 9 0 08 Dec 2021
Explainable Biomedical Recommendations via Reinforcement Learning Reasoning on Knowledge Graphs G. Edwards Sebastian Nilsson Benedek Rozemberczki Eliseo Papa 23 12 0 20 Nov 2021
A Review of Biomedical Datasets Relating to Drug Discovery: A Knowledge Graph Perspective Stephen Bonner Ian P Barrett Cheng Ye Rowan Swiers Ola Engkvist A. Bender Charles Tapley Hoyt William L. Hamilton 32 94 0 19 Feb 2021
Scalable and interpretable rule-based link prediction for large heterogeneous knowledge graphs Simon Ott Laura Graf Asan Agibetov Christian Meilicke Matthias Samwald AI4CE 28 1 0 10 Dec 2020