Optimizing the Dice Score and Jaccard Index for Medical Image Segmentation: Theory & Practice

5 November 2019

Matthew Blaschko

Papers citing "Optimizing the Dice Score and Jaccard Index for Medical Image Segmentation: Theory & Practice"

28 / 28 papers shown

Title
Can Foundation Models Really Segment Tumors? A Benchmarking Odyssey in Lung CT Imaging Elena Mulero Ayllón Massimiliano Mantegna Linlin Shen Paolo Soda V. Guarrasi M. Tortora 47 0 0 02 May 2025
Post-Hurricane Debris Segmentation Using Fine-Tuned Foundational Vision Models Kooshan Amini Yuhao Liu Jamie Ellen Padgett Guha Balakrishnan Ashok Veeraraghavan 33 0 0 17 Apr 2025
GBT-SAM: Adapting a Foundational Deep Learning Model for Generalizable Brain Tumor Segmentation via Efficient Integration of Multi-Parametric MRI Data Cecilia Diana-Albelda Roberto Alcover-Couso Álvaro García-Martín Jesús Bescós Marcos Escudero-Viñolo 44 1 0 06 Mar 2025
Deep learning and classical computer vision techniques in medical image analysis: Case studies on brain MRI tissue segmentation, lung CT COPD registration, and skin lesion classification Anyimadu Daniel Tweneboah Suleiman Taofik Ahmed Hossain Mohammad Imran 68 0 0 26 Feb 2025
Open-Source Manually Annotated Vocal Tract Database for Automatic Segmentation from 3D MRI Using Deep Learning: Benchmarking 2D and 3D Convolutional and Transformer Networks Subin Erattakulangara Karthika Kelat Katie Burnham Rachel Balbi Sarah E. Gerard David Meyer Sajan Goud Lingala 42 1 0 08 Jan 2025
Autonomous Visual Fish Pen Inspections for Estimating the State of Biofouling Buildup Using ROV -- Extended Abstract Matej Fabijanić Nadir Kapetanović Nikola Mišković 14 4 0 19 Sep 2024
SiNGR: Brain Tumor Segmentation via Signed Normalized Geodesic Transform Regression Trung Dang Huy Hoang Nguyen A. Tiulpin 32 3 0 27 May 2024
Lumbar Spine Tumor Segmentation and Localization in T2 MRI Images Using AI Rikathi Pal Sudeshna Mondal Aditi Gupta Priya Saha Somoballi Ghoshal Amlan Chakrabarti S. Sur-Kolay 13 4 0 07 May 2024
BC-MRI-SEG: A Breast Cancer MRI Tumor Segmentation Benchmark Anthony Bilic Chen Chen OOD 43 0 0 21 Apr 2024
FusionVision: A comprehensive approach of 3D object reconstruction and segmentation from RGB-D cameras using YOLO and fast segment anything Safouane El Ghazouali Youssef Mhirit Ali Oukhrid Umberto Michelucci H. Nouira 46 8 0 29 Feb 2024
Domain-Specific Deep Learning Feature Extractor for Diabetic Foot Ulcer Detection Reza Basiri M. Popovic Shehroz S. Khan 21 3 0 27 Nov 2023
DRAC: Diabetic Retinopathy Analysis Challenge with Ultra-Wide Optical Coherence Tomography Angiography Images Bo Qian Haoxing Chen Xiangning Wang Haoxuan Che Gitaek Kwon ... Xiaokang Yang Yiyu Cai Weiping Jia Huating Li Bin Sheng 27 5 0 05 Apr 2023
Noisy Image Segmentation With Soft-Dice M. Nordström Henrik Hult A. Maki F. Löfman 37 2 0 03 Apr 2023
A Generalized Surface Loss for Reducing the Hausdorff Distance in Medical Imaging Segmentation A. Celaya B. Rivière David T. Fuentes MedIm 28 8 0 08 Feb 2023
Multi Kernel Positional Embedding ConvNeXt for Polyp Segmentation Trong-Hieu Nguyen-Mau Quoc-Huy Trinh Nhat-Tan Bui M. Tran Hai-Dang Nguyen MedIm 27 8 0 17 Jan 2023
Double U-Net for Super-Resolution and Segmentation of Live Cell Images Mayur Bhandary J. P. Reyes Eylül Ertay Aman Panda SupR SSeg 13 3 0 05 Dec 2022
Theoretical analysis and experimental validation of volume bias of soft Dice optimized segmentation maps in the context of inherent uncertainty J. Bertels D. Robben Dirk Vandermeulen P. Suetens 30 19 0 08 Nov 2022
USE-Evaluator: Performance Metrics for Medical Image Segmentation Models with Uncertain, Small or Empty Reference Annotations Sophie Ostmeier Brian Axelrod J. Bertels Fabian Isensee Maarten G.Lansberg Soren Christensen G. Albers Li-Jia Li J. Heit 21 11 0 26 Sep 2022
OysterNet: Enhanced Oyster Detection Using Simulation Xiao-sheng Lin N. Sanket N. Karapetyan Yiannis Aloimonos 45 15 0 16 Sep 2022
On the Optimal Combination of Cross-Entropy and Soft Dice Losses for Lesion Segmentation with Out-of-Distribution Robustness Adrian Galdran G. Carneiro M. A. G. Ballester OOD 21 17 0 13 Sep 2022
DOMINO: Domain-aware Model Calibration in Medical Image Segmentation Skylar E. Stolte Kyle Volle A. Indahlastari Alejandro Albizu A. Woods Kevin Brink Matthew Hale R. Fang 25 5 0 13 Sep 2022
Improving Classification Model Performance on Chest X-Rays through Lung Segmentation Hilda Azimi Jianxing Zhang Pengcheng Xi H. Asad Ashkan Ebadi Stéphane Tremblay Alexander Wong 26 7 0 22 Feb 2022
A Survey on Training Challenges in Generative Adversarial Networks for Biomedical Image Analysis Muhammad Muneeb Saad Ruairi O'Reilly M. H. Rehmani MedIm 44 35 0 19 Jan 2022
Effect of the output activation function on the probabilities and errors in medical image segmentation Lars Nieradzik G. Scheuermann D. Saur Christina Gillmann SSeg MedIm UQCV 35 6 0 02 Sep 2021
Self-Paced Contrastive Learning for Semi-supervised Medical Image Segmentation with Meta-labels Jizong Peng Ping Wang Chrisitian Desrosiers M. Pedersoli SSL 31 63 0 29 Jul 2021
Optimization for Medical Image Segmentation: Theory and Practice when evaluating with Dice Score or Jaccard Index Tom Eelbode J. Bertels Maxim Berman Dirk Vandermeulen F. Maes R. Bisschops Matthew B. Blaschko 30 255 0 26 Oct 2020
Impact of lung segmentation on the diagnosis and explanation of COVID-19 in chest X-ray images Lucas O. Teixeira R. M. Pereira Diego Bertolini Luiz Eduardo Soares de Oliveira L. Nanni George D. C. Cavalcanti Yandre M. G. Costa 21 114 0 21 Sep 2020
Optimization with soft Dice can lead to a volumetric bias J. Bertels D. Robben Dirk Vandermeulen P. Suetens 18 23 0 06 Nov 2019