High-resolution Markov state models for the dynamics of Trp-cage miniprotein constructed over slow folding modes identified by state-free reversible VAMPnets

12 June 2019

Papers citing "High-resolution Markov state models for the dynamics of Trp-cage miniprotein constructed over slow folding modes identified by state-free reversible VAMPnets"

7 / 7 papers shown

Title
Nonlinear Discovery of Slow Molecular Modes using State-Free Reversible VAMPnets Wei Chen Hythem Sidky Andrew L. Ferguson 29 96 0 09 Feb 2019
Variational Selection of Features for Molecular Kinetics Martin K. Scherer B. Husic Moritz Hoffmann Fabian Paul Hao Wu Frank Noé 75 50 0 28 Nov 2018
Time-lagged autoencoders: Deep learning of slow collective variables for molecular kinetics C. Wehmeyer Frank Noé AI4CE BDL 148 360 0 30 Oct 2017
VAMPnets: Deep learning of molecular kinetics Andreas Mardt Luca Pasquali Hao Wu Frank Noé 60 544 0 16 Oct 2017
Estimation and uncertainty of reversible Markov models Benjamin Trendelkamp-Schroer Hao Wu Fabian Paul Frank Noé 94 129 0 19 Jul 2015
Variational cross-validation of slow dynamical modes in molecular kinetics R. McGibbon Vijay S. Pande 63 174 0 30 Jul 2014
A variational approach to modeling slow processes in stochastic dynamical systems Frank Noé Feliks Nuske 69 293 0 29 Nov 2012