Path-Augmented Graph Transformer Network

Path-Augmented Graph Transformer Network

29 May 2019

Regina Barzilay

Papers citing "Path-Augmented Graph Transformer Network"

16 / 16 papers shown

Title
DeepProtein: Deep Learning Library and Benchmark for Protein Sequence Learning Jiaqing Xie Yue Zhao 38 0 0 02 Oct 2024
Uni-ELF: A Multi-Level Representation Learning Framework for Electrolyte Formulation Design Boshen Zeng Sian Chen Xinxin Liu Changhong Chen Bin Deng Xiaoxu Wang Zhifeng Gao Yuzhi Zhang Weinan E Linfeng Zhang 15 1 0 08 Jul 2024
Graph Scattering beyond Wavelet Shackles Christian Koke Gitta Kutyniok 24 4 0 26 Jan 2023
Open World Learning Graph Convolution for Latency Estimation in Routing Networks Yifei Jin Marios Daoutis Sarunas Girdzijauskas Aristides Gionis 13 1 0 08 Jul 2022
Discovering and Explaining the Representation Bottleneck of Graph Neural Networks from Multi-order Interactions Fang Wu Siyuan Li Lirong Wu Dragomir R. Radev Stan Z. Li 27 2 0 15 May 2022
Rewiring with Positional Encodings for Graph Neural Networks Rickard Brüel-Gabrielsson Mikhail Yurochkin Justin Solomon AI4CE 25 32 0 29 Jan 2022
Permutation invariant graph-to-sequence model for template-free retrosynthesis and reaction prediction Zhengkai Tu Connor W. Coley 30 90 0 19 Oct 2021
Molformer: Motif-based Transformer on 3D Heterogeneous Molecular Graphs Fang Wu Dragomir R. Radev Huabin Xing ViT 36 54 0 04 Oct 2021
Learning Attributed Graph Representations with Communicative Message Passing Transformer Jianwen Chen Shuangjia Zheng Ying Song Jiahua Rao Yuedong Yang 30 46 0 19 Jul 2021
Do Transformers Really Perform Bad for Graph Representation? Chengxuan Ying Tianle Cai Shengjie Luo Shuxin Zheng Guolin Ke Di He Yanming Shen Tie-Yan Liu GNN 33 433 0 09 Jun 2021
ChemBERTa: Large-Scale Self-Supervised Pretraining for Molecular Property Prediction Seyone Chithrananda Gabriel Grand Bharath Ramsundar AI4CE 37 389 0 19 Oct 2020
Distance Encoding: Design Provably More Powerful Neural Networks for Graph Representation Learning Pan Li Yanbang Wang Hongwei Wang J. Leskovec GNN 23 12 0 31 Aug 2020
Spatio-Temporal Graph Transformer Networks for Pedestrian Trajectory Prediction Cunjun Yu Xiao Ma Jiawei Ren Haiyu Zhao Shuai Yi 26 459 0 18 May 2020
Neural Message Passing on High Order Paths Daniel Flam-Shepherd Tony C Wu Pascal Friederich Alán Aspuru-Guzik GNN AI4CE 24 49 0 24 Feb 2020
MoleculeNet: A Benchmark for Molecular Machine Learning Zhenqin Wu Bharath Ramsundar Evan N. Feinberg Joseph Gomes C. Geniesse Aneesh S. Pappu K. Leswing Vijay S. Pande OOD 242 1,780 0 02 Mar 2017
Effective Approaches to Attention-based Neural Machine Translation Thang Luong Hieu H. Pham Christopher D. Manning 218 7,926 0 17 Aug 2015