HoVer-Net: Simultaneous Segmentation and Classification of Nuclei in Multi-Tissue Histology Images

16 December 2018

Papers citing "HoVer-Net: Simultaneous Segmentation and Classification of Nuclei in Multi-Tissue Histology Images"

50 / 110 papers shown

Title
Language models are good pathologists: using attention-based sequence reduction and text-pretrained transformers for efficient WSI classification Juan Pisula Katarzyna Bozek VLM MedIm 36 3 0 14 Nov 2022
Valuing Vicinity: Memory attention framework for context-based semantic segmentation in histopathology Oliver Ester Fabian Horst C. Seibold J. Keyl Saskia Ting ... P. Ivanyi Viktor Grünwald J. Bräsen Jan Egger Jens Kleesiek 21 7 0 21 Oct 2022
Unsupervised Dense Nuclei Detection and Segmentation with Prior Self-activation Map For Histology Images Pingyi Chen Chenglu Zhu Zhongyi Shui Jiatong Cai S. Zheng Shichuan Zhang Ling Yang 21 4 0 14 Oct 2022
SIAN: Style-Guided Instance-Adaptive Normalization for Multi-Organ Histopathology Image Synthesis Haotian Wang Min Xian Aleksandar Vakanski Bryar Shareef MedIm 46 6 0 02 Sep 2022
MRL: Learning to Mix with Attention and Convolutions Shlok Mohta Hisahiro Suganuma Yoshiki Tanaka 28 2 0 30 Aug 2022
Nuclei & Glands Instance Segmentation in Histology Images: A Narrative Review Esha Sadia Nasir Arshi Parvaiz M. Fraz 39 14 0 26 Aug 2022
Efficient Self-Supervision using Patch-based Contrastive Learning for Histopathology Image Segmentation Nicklas Boserup Raghavendra Selvan SSL 28 7 0 23 Aug 2022
Deep Learning-Based Objective and Reproducible Osteosarcoma Chemotherapy Response Assessment and Outcome Prediction D. J. Ho Narasimhan P. Agaram M. Jean Stephanie D. Suser Cynthia Chu ... P. Meyers L. Wexler J. Healey Thomas J. Fuchs M. Hameed 16 15 0 09 Aug 2022
Unsupervised Tissue Segmentation via Deep Constrained Gaussian Network Yang Nan Pen Tang Guyue Zhang C. Zeng Zhihong Liu Zhifan Gao Heye Zhang Guang Yang 15 9 0 04 Aug 2022
Weakly Supervised Deep Instance Nuclei Detection using Points Annotation in 3D Cardiovascular Immunofluorescent Images Nazanin Moradinasab Yash Sharma Laura S. Shankman Gary K. Owens Donald E. Brown 24 1 0 29 Jul 2022
Efficient High-Resolution Deep Learning: A Survey Arian Bakhtiarnia Qi Zhang Alexandros Iosifidis MedIm 21 19 0 26 Jul 2022
Scale dependant layer for self-supervised nuclei encoding Peter Naylor Yao-Hung Hubert Tsai Marick Laé Makoto Yamada SSL 36 0 0 22 Jul 2022
MaNi: Maximizing Mutual Information for Nuclei Cross-Domain Unsupervised Segmentation Yash Sharma Sana Syed Donald E. Brown 28 11 0 29 Jun 2022
A review of machine learning approaches, challenges and prospects for computational tumor pathology Liangrui Pan Zhichao Feng Shaoliang Peng AI4CE 27 7 0 31 May 2022
HoVer-Trans: Anatomy-aware HoVer-Transformer for ROI-free Breast Cancer Diagnosis in Ultrasound Images Y. Mo Chu Han Yu Liu Min Liu Zhenwei Shi ... Zeyan Xu Xiaomei Huang Zaiyi Liu Ying Wang C. Liang ViT MedIm 40 51 0 17 May 2022
Mapping the landscape of histomorphological cancer phenotypes using self-supervised learning on unlabeled, unannotated pathology slides A. Quiros N. Coudray A. Yeaton Xinyu Yang Bojing Liu ... H. Pass A. Moreira J. L. Quesne A. Tsirigos Ke-Fei Yuan SSL 21 5 0 04 May 2022
WSSS4LUAD: Grand Challenge on Weakly-supervised Tissue Semantic Segmentation for Lung Adenocarcinoma Chu Han Xipeng Pan Lixu Yan Huan Lin Bingbing Li ... Chengda Lu Xin Chen C. Liang Qingling Zhang Zaiyi Liu 33 28 0 13 Apr 2022
Mitosis domain generalization in histopathology images -- The MIDOG challenge Marc Aubreville N. Stathonikos C. Bertram Robert Klopleisch N. T. ter Hoeve ... A. Khademi Sen Yang Xiyue Wang M. Veta Katharina Breininger 26 95 0 06 Apr 2022
Towards Bi-directional Skip Connections in Encoder-Decoder Architectures and Beyond Tiange Xiang Chaoyi Zhang Xinyi Wang Yang Song Dongnan Liu Heng-Chiao Huang Weidong (Tom) Cai MedIm AI4CE SSeg 35 13 0 11 Mar 2022
MF-Hovernet: An Extension of Hovernet for Colon Nuclei Identification and Counting (CoNiC) Challenge Thi Tuong Vi Vo Soo-Hyung Kim Taebum Lee 24 1 0 04 Mar 2022
Nuclei instance segmentation and classification in histopathology images with StarDist Martin Weigert Uwe Schmidt 29 49 0 03 Mar 2022
A Standardized Pipeline for Colon Nuclei Identification and Counting Challenge Jijun Cheng Xipeng Pan Feihu Hou Bingchao Zhao Jiatai Lin Zhenbing Liu Zaiyi Liu Chu Han 17 2 0 01 Mar 2022
RestainNet: a self-supervised digital re-stainer for stain normalization Bingchao Zhao Jiatai Lin C. Liang Zongjian Yi Xin Chen ... Weihao Qiu Dan Li Li Liang Chu Han Zaiyi Liu 19 26 0 28 Feb 2022
ConvNeXt-backbone HoVerNet for nuclei segmentation and classification Jiachen Li Chixin Wang Banban Huang Zekun Zhou 24 11 0 28 Feb 2022
ciscNet -- A Single-Branch Cell Instance Segmentation and Classification Network Moritz Böhland Oliver Neumann Marcel P. Schilling Markus Reischl Ralf Mikut Katharina Löffler Tim Scherr 22 4 0 25 Feb 2022
Ensembling Handcrafted Features with Deep Features: An Analytical Study for Classification of Routine Colon Cancer Histopathological Nuclei Images S. Tripathi S. Singh 27 16 0 22 Feb 2022
Graph Convolutional Networks for Multi-modality Medical Imaging: Methods, Architectures, and Clinical Applications Kexin Ding Mu Zhou Zichen Wang Qiao Liu C. Arnold Shaoting Zhang Dimitris N. Metaxas GNN MedIm AI4CE 38 12 0 17 Feb 2022
A Pragmatic Machine Learning Approach to Quantify Tumor Infiltrating Lymphocytes in Whole Slide Images N. Shvetsov Morten Grønnesby Edvard Pedersen Kajsa Møllersen Lill-ToveRasmussen Busund Ruth Schwienbacher L. A. Bongo T. Kilvaer 29 14 0 14 Feb 2022
CoNIC: Colon Nuclei Identification and Counting Challenge 2022 S. Graham Mostafa Jahanifar Q. Vu G. Hadjigeorghiou Thomas Leech David R. J. Snead S. Raza F. Minhas Nasir M. Rajpoot 25 64 0 29 Nov 2021
Sharp-GAN: Sharpness Loss Regularized GAN for Histopathology Image Synthesis S. Butte Haotian Wang Min Xian Aleksandar Vakanski GAN MedIm 24 18 0 27 Oct 2021
Multi-Layer Pseudo-Supervision for Histopathology Tissue Semantic Segmentation using Patch-level Classification Labels Chu Han Jiatai Lin Jinhai Mai Yi Wang Qingling Zhang ... Zeyan Xu Xiaomei Huang Guoqiang Han Chang-xiu Liang Zaiyi Liu 32 89 0 14 Oct 2021
SlideGraph+: Whole Slide Image Level Graphs to Predict HER2Status in Breast Cancer Wenqi Lu M. Toss E. Rakha Nasir M. Rajpoot F. Minhas 25 102 0 12 Oct 2021
Sk-Unet Model with Fourier Domain for Mitosis Detection Sen Yang F. Luo Jun Zhang Xiyue Wang 13 8 0 01 Sep 2021
Lizard: A Large-Scale Dataset for Colonic Nuclear Instance Segmentation and Classification S. Graham Mostafa Jahanifar A. Azam M. Nimir Yee Wah Tsang ... S. Raza H. Eldaly K. Gopalakrishnan David R. J. Snead Nasir M. Rajpoot 34 124 0 25 Aug 2021
Efficient and Generic Interactive Segmentation Framework to Correct Mispredictions during Clinical Evaluation of Medical Images Bhavani Sambaturu Ashutosh Gupta C. V. Jawahar Chetan Arora MedIm 39 3 0 06 Aug 2021
HistoCartography: A Toolkit for Graph Analytics in Digital Pathology Guillaume Jaume Pushpak Pati Valentin Anklin A. Foncubierta M. Gabrani 35 45 0 21 Jul 2021
A Survey on Graph-Based Deep Learning for Computational Histopathology David Ahmedt-Aristizabal M. Armin Simon Denman Clinton Fookes L. Petersson GNN AI4CE 26 108 0 01 Jul 2021
SRPN: similarity-based region proposal networks for nuclei and cells detection in histology images Yibao Sun Xingru Huang Huiyu Zhou Qianni Zhang 33 31 0 25 Jun 2021
Sparse-shot Learning with Exclusive Cross-Entropy for Extremely Many Localisations Andreas Panteli Jonas Teuwen H. Horlings E. Gavves 26 3 0 21 Apr 2021
NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation M. Amgad Lamees A. Atteya Hagar Hussein K. Mohammed Ehab Hafiz ... Critical Care David Manthey Atlanta D. Neurology Lurie Cancer Center 44 74 0 18 Feb 2021
CPP-Net: Context-aware Polygon Proposal Network for Nucleus Segmentation Shengcong Chen Changxing Ding Minfeng Liu Jun Cheng Dacheng Tao 45 46 0 13 Feb 2021
HIVE-Net: Centerline-Aware HIerarchical View-Ensemble Convolutional Network for Mitochondria Segmentation in EM Images Zhimin Yuan Xiaofeng Ma Jiajin Yi Zhengrong Luo Jialin Peng 21 23 0 08 Jan 2021
Self supervised contrastive learning for digital histopathology Ozan Ciga Tony Xu Anne L. Martel SSL 114 307 0 27 Nov 2020
Quantifying Explainers of Graph Neural Networks in Computational Pathology Guillaume Jaume Pushpak Pati Behzad Bozorgtabar Antonio Foncubierta-Rodríguez Florinda Feroce A. Anniciello T. Rau Jean-Philippe Thiran M. Gabrani O. Goksel FAtt 26 76 0 25 Nov 2020
Deep learning models for gastric signet ring cell carcinoma classification in whole slide images F. Kanavati Shin Ichihara Michael Rambeau O. Iizuka K. Arihiro M. Tsuneki MedIm 30 24 0 18 Nov 2020
Federated Learning for Computational Pathology on Gigapixel Whole Slide Images Ming Y. Lu Dehan Kong Jana Lipkova Richard J. Chen Rajendra Singh Drew F. K. Williamson Tiffany Y. Chen Faisal Mahmood FedML MedIm 31 169 0 21 Sep 2020
Self-Supervised Nuclei Segmentation in Histopathological Images Using Attention M. Sahasrabudhe Stergios Christodoulidis R. Salgado S. Michiels S. Loi Fabrice André Nikos Paragios Maria Vakalopoulou 25 64 0 16 Jul 2020
HACT-Net: A Hierarchical Cell-to-Tissue Graph Neural Network for Histopathological Image Classification Pushpak Pati Guillaume Jaume Lauren Alisha Fernandes A. Foncubierta Florinda Feroce ... G. Botti O. Goksel Jean-Philippe Thiran Maria Frucci M. Gabrani 29 69 0 01 Jul 2020
Towards Explainable Graph Representations in Digital Pathology Guillaume Jaume Pushpak Pati A. Foncubierta-Rodríguez Florinda Feroce G. Scognamiglio A. Anniciello Jean-Philippe Thiran O. Goksel M. Gabrani 16 40 0 01 Jul 2020
BiO-Net: Learning Recurrent Bi-directional Connections for Encoder-Decoder Architecture Tiange Xiang Chaoyi Zhang Dongnan Liu Yang Song Heng-Chiao Huang Weidong (Tom) Cai SSeg 27 80 0 01 Jul 2020