A Corpus with Multi-Level Annotations of Patients, Interventions and Outcomes to Support Language Processing for Medical Literature

11 June 2018

Papers citing "A Corpus with Multi-Level Annotations of Patients, Interventions and Outcomes to Support Language Processing for Medical Literature"

50 / 80 papers shown

Title
CURIE: Evaluating LLMs On Multitask Scientific Long Context Understanding and Reasoning Hao Cui Zahra Shamsi Gowoon Cheon Xuejian Ma Shutong Li ... Eun-Ah Kim M. Brenner Viren Jain Sameera Ponda Subhashini Venugopalan ELM LRM 57 0 0 14 Mar 2025
A Survey of Large Language Models for Healthcare: from Data, Technology, and Applications to Accountability and Ethics Kai He Rui Mao Qika Lin Yucheng Ruan Xiang Lan Mengling Feng Min Zhang LM&MA AILaw 107 155 0 28 Jan 2025
Clinical Insights: A Comprehensive Review of Language Models in Medicine Nikita Neveditsin Pawan Lingras V. Mago LM&MA 58 4 0 08 Jan 2025
Large Language Model Benchmarks in Medical Tasks Lawrence K. Q. Yan Ming Li Yujie Zhang Caitlyn Heqi Yin Cheng Fei ... Ziqian Bi Pohsun Feng Keyu Chen Junyu Liu Qian Niu LM&MA AI4MH 55 6 0 28 Oct 2024
A Preliminary Study of o1 in Medicine: Are We Closer to an AI Doctor? Yunfei Xie Juncheng Wu Haoqin Tu Siwei Yang Bingchen Zhao Yongshuo Zong Qiao Jin Cihang Xie Yuyin Zhou LM&MA ELM LRM 52 19 0 23 Sep 2024
AlpaPICO: Extraction of PICO Frames from Clinical Trial Documents Using LLMs Madhusudan Ghosh Shrimon Mukherjee Asmit Ganguly Partha Basuchowdhuri S. Naskar Debasis Ganguly 38 7 0 15 Sep 2024
Pre-training data selection for biomedical domain adaptation using journal impact metrics Mathieu Lai-king P. Paroubek 34 0 0 04 Sep 2024
MedDec: A Dataset for Extracting Medical Decisions from Discharge Summaries Mohamed Elgaar Jiali Cheng Nidhi Vakil Hadi Amiri Leo Anthony Celi 36 2 0 23 Aug 2024
LLMs are not Zero-Shot Reasoners for Biomedical Information Extraction Aishik Nagar Viktor Schlegel Thanh-Tung Nguyen Hao Li Yuping Wu Kuluhan Binici Stefan Winkler LRM 35 3 0 22 Aug 2024
A Survey on Medical Large Language Models: Technology, Application, Trustworthiness, and Future Directions Lei Liu Xiaoyan Yang Junchi Lei Xiaoyang Liu Yue Shen ... Peng Wei Jinjie Gu Zhixuan Chu Zhan Qin Kui Ren LM&MA AILaw 48 14 0 06 Jun 2024
Literature Filtering for Systematic Reviews with Transformers John Hawkins David Tivey MedIm 21 0 0 30 May 2024
Exploring the use of a Large Language Model for data extraction in systematic reviews: a rapid feasibility study Lena Schmidt Kaitlyn Hair Sergio Graziozi Fiona Campbell Claudia Kapp Alireza Khanteymoori Dawn Craig Mark Engelbert James Thomas 36 8 0 23 May 2024
A Comprehensive Survey on Evaluating Large Language Model Applications in the Medical Industry Yining Huang Keke Tang Meilian Chen Boyuan Wang ELM LM&MA 29 15 0 24 Apr 2024
Unveiling LLM Evaluation Focused on Metrics: Challenges and Solutions Taojun Hu Xiao-Hua Zhou ELM 41 13 0 14 Apr 2024
CoDa: Constrained Generation based Data Augmentation for Low-Resource NLP Chandra Kiran Reddy Evuru Sreyan Ghosh Sonal Kumar S. Ramaneswaran Utkarsh Tyagi Dinesh Manocha 42 8 0 30 Mar 2024
On-the-fly Definition Augmentation of LLMs for Biomedical NER Monica Munnangi Sergey Feldman Byron C. Wallace Silvio Amir Tom Hope Aakanksha Naik 40 11 0 29 Mar 2024
SAPT: A Shared Attention Framework for Parameter-Efficient Continual Learning of Large Language Models Weixiang Zhao Shilong Wang Yulin Hu Yanyan Zhao Bing Qin Xuanyu Zhang Qing Yang Dongliang Xu Wanxiang Che KELM CLL 39 12 0 16 Jan 2024
A Span-based Model for Extracting Overlapping PICO Entities from RCT Publications Gongbo Zhang Yiliang Zhou Yan Hu Hua Xu Chunhua Weng Yifan Peng 14 0 0 08 Jan 2024
CSMeD: Bridging the Dataset Gap in Automated Citation Screening for Systematic Literature Reviews Wojciech Kusa Óscar E. Mendoza Matthias Samwald Petr Knoth Allan Hanbury 47 4 0 21 Nov 2023
nach0: Multimodal Natural and Chemical Languages Foundation Model M. Livne Z. Miftahutdinov E. Tutubalina Maksim Kuznetsov Daniil Polykovskiy ... Aastha Jhunjhunwala Anthony Costa Alex Aliper Alán Aspuru-Guzik Alex Zhavoronkov AI4CE 27 13 0 21 Nov 2023
CARE: Extracting Experimental Findings From Clinical Literature Aakanksha Naik Bailey Kuehl Erin Bransom Doug Downey Tom Hope 28 1 0 16 Nov 2023
Can large language models replace humans in the systematic review process? Evaluating GPT-4's efficacy in screening and extracting data from peer-reviewed and grey literature in multiple languages Qusai Khraisha Sophie Put Johanna Kappenberg Azza Warraitch Kristin Hadfield LM&MA ELM 37 70 0 26 Oct 2023
Give Me the Facts! A Survey on Factual Knowledge Probing in Pre-trained Language Models Paul Youssef Osman Alperen Koracs Meijie Li Jorg Schlotterer Christin Seifert KELM 24 16 0 25 Oct 2023
An Empirical Evaluation of Prompting Strategies for Large Language Models in Zero-Shot Clinical Natural Language Processing Sonish Sivarajkumar Mark Kelley Alyssa Samolyk-Mazzanti Shyam Visweswaran Yanshan Wang LM&MA 46 28 0 14 Sep 2023
UniversalNER: Targeted Distillation from Large Language Models for Open Named Entity Recognition Wenxuan Zhou Sheng Zhang Yu Gu Muhao Chen Hoifung Poon 30 60 0 07 Aug 2023
PubMed and Beyond: Biomedical Literature Search in the Age of Artificial Intelligence Qiao Jin Robert Leaman Zhiyong Lu LM&MA 35 41 0 18 Jul 2023
Several categories of Large Language Models (LLMs): A Short Survey Saurabh Pahune Manoj Chandrasekharan AILaw 25 14 0 05 Jul 2023
UMASS_BioNLP at MEDIQA-Chat 2023: Can LLMs generate high-quality synthetic note-oriented doctor-patient conversations? Junda Wang Zonghai Yao Avijit Mitra Samuel Osebe Zhichao Yang Hongfeng Yu LM&MA MedIm 29 13 0 29 Jun 2023
Self-Verification Improves Few-Shot Clinical Information Extraction Zelalem Gero Chandan Singh Hao Cheng Tristan Naumann Michel Galley Jianfeng Gao Hoifung Poon 42 54 0 30 May 2023
Automated Metrics for Medical Multi-Document Summarization Disagree with Human Evaluations Lucy Lu Wang Yulia Otmakhova Jay DeYoung Thinh Hung Truong Bailey Kuehl Erin Bransom Byron C. Wallace 113 20 0 23 May 2023
BioDEX: Large-Scale Biomedical Adverse Drug Event Extraction for Real-World Pharmacovigilance Karel DÓosterlinck François Remy Johannes Deleu Thomas Demeester Chris Develder Klim Zaporojets Aneiss Ghodsi Simon Ellershaw Jack R. Collins Christopher Potts 56 11 0 22 May 2023
BioAug: Conditional Generation based Data Augmentation for Low-Resource Biomedical NER Sreyan Ghosh Utkarsh Tyagi Sonal Kumar Dinesh Manocha MedIm 34 10 0 18 May 2023
Jointly Extracting Interventions, Outcomes, and Findings from RCT Reports with LLMs Somin Wadhwa Jay DeYoung Benjamin E. Nye Silvio Amir Byron C. Wallace 8 14 0 05 May 2023
MasonNLP+ at SemEval-2023 Task 8: Extracting Medical Questions, Experiences and Claims from Social Media using Knowledge-Augmented Pre-trained Language Models Giridhar Kaushik Ramachandran Haritha Gangavarapu K. Lybarger Özlem Uzuner 30 1 0 26 Apr 2023
An Interactive UI to Support Sensemaking over Collections of Parallel Texts Joyce Zhou Elena L. Glassman Daniel S. Weld 36 1 0 11 Mar 2023
Med-EASi: Finely Annotated Dataset and Models for Controllable Simplification of Medical Texts Chandrayee Basu Rosni Vasu Michihiro Yasunaga Qiang Yang 21 16 0 17 Feb 2023
VarMAE: Pre-training of Variational Masked Autoencoder for Domain-adaptive Language Understanding Dou Hu Xiaolong Hou Xiyang Du Mengyuan Zhou Lian-Xin Jiang Yang Mo Xiaofeng Shi 45 12 0 01 Nov 2022
CCS Explorer: Relevance Prediction, Extractive Summarization, and Named Entity Recognition from Clinical Cohort Studies Irfan Al-Hussaini D. An Albert Lee Sarah Bi Cassie S. Mitchell 11 7 0 01 Nov 2022
Influence Functions for Sequence Tagging Models Sarthak Jain Varun Manjunatha Byron C. Wallace A. Nenkova TDI 35 8 0 25 Oct 2022
RedHOT: A Corpus of Annotated Medical Questions, Experiences, and Claims on Social Media Somin Wadhwa Vivek Khetan Silvio Amir Byron C. Wallace 21 18 0 12 Oct 2022
Enriching Biomedical Knowledge for Low-resource Language Through Large-Scale Translation Long Phan Tai Dang H. Tran Trieu H. Trinh Vy Phan Lam D. Chau Minh-Thang Luong 20 8 0 11 Oct 2022
LED down the rabbit hole: exploring the potential of global attention for biomedical multi-document summarisation Yulia Otmakhova Thinh Hung Truong Timothy Baldwin Trevor Cohn Karin Verspoor Jey Han Lau 90 6 0 19 Sep 2022
BigBIO: A Framework for Data-Centric Biomedical Natural Language Processing Jason Alan Fries Leon Weber Natasha Seelam Gabriel Altay Debajyoti Datta ... Minh Chien Vu Trishala Neeraj Jonas Golde Albert Villanova del Moral Benjamin Beilharz LM&MA 100 46 0 30 Jun 2022
Large Language Models are Few-Shot Clinical Information Extractors Monica Agrawal S. Hegselmann Hunter Lang Yoon Kim David Sontag BDL LM&MA 170 335 0 25 May 2022
Position-based Prompting for Health Outcome Generation Micheal Abaho Danushka Bollegala P. Williamson S. Dodd 12 9 0 30 Mar 2022
LinkBERT: Pretraining Language Models with Document Links Michihiro Yasunaga J. Leskovec Percy Liang KELM 29 353 0 29 Mar 2022
Assessment of contextualised representations in detecting outcome phrases in clinical trials Micheal Abaho Danushka Bollegala P. Williamson S. Dodd 29 8 0 13 Feb 2022
Mirror Matching: Document Matching Approach in Seed-driven Document Ranking for Medical Systematic Reviews Grace E. Lee Aixin Sun OOD 9 1 0 28 Dec 2021
Fine-Tuning Large Neural Language Models for Biomedical Natural Language Processing Robert Tinn Hao Cheng Yu Gu Naoto Usuyama Xiaodong Liu Tristan Naumann Jianfeng Gao Hoifung Poon LM&MA 17 111 0 15 Dec 2021
Automated tabulation of clinical trial results: A joint entity and relation extraction approach with transformer-based language representations Jetsun Whitton Anthony Hunter LMTD 23 10 0 10 Dec 2021