Onto2Vec: joint vector-based representation of biological entities and
their ontology-based annotations

Onto2Vec: joint vector-based representation of biological entities and their ontology-based annotations

31 January 2018

Xin Gao

Robert Hoehndorf

Papers citing "Onto2Vec: joint vector-based representation of biological entities and their ontology-based annotations"

6 / 6 papers shown

Title
Ontology Embedding: A Survey of Methods, Applications and Resources Jiaoyan Chen Olga Mashkova Fernando Zhapa-Camacho Robert Hoehndorf Yuan He Ian Horrocks 50 4 0 16 Jun 2024
Embedding Ontologies via Incorporating Extensional and Intensional Knowledge Keyu Wang Guilin Qi Jiaoyan Chen Yi Huang Tianxing Wu 63 1 0 20 Jan 2024
Contextual Semantic Embeddings for Ontology Subsumption Prediction Jiaoyan Chen Yuan He Yuxia Geng Ernesto Jiménez-Ruiz Hang Dong Ian Horrocks 35 50 0 20 Feb 2022
Predicting Gene-Disease Associations with Knowledge Graph Embeddings over Multiple Ontologies Susana Nunes R. T. Sousa Catia Pesquita AI4CE 9 16 0 11 May 2021
Deep learning in bioinformatics: introduction, application, and perspective in big data era Yu Li Chao Huang Lizhong Ding Zhongxiao Li Yijie Pan Xin Gao AI4CE 21 295 0 28 Feb 2019
OPA2Vec: combining formal and informal content of biomedical ontologies to improve similarity-based prediction F. Z. Smaili Xin Gao Robert Hoehndorf 17 142 0 29 Apr 2018