Cross-type Biomedical Named Entity Recognition with Deep Multi-Task Learning

30 January 2018

Xuan Wang

Yu Zhang

Xiang Ren

Papers citing "Cross-type Biomedical Named Entity Recognition with Deep Multi-Task Learning"

30 / 30 papers shown

Title
VANER: Leveraging Large Language Model for Versatile and Adaptive Biomedical Named Entity Recognition Junyi Bian W. Zhai Xiaodi Huang Jiaxuan Zheng Shanfeng Zhu 43 2 0 27 Apr 2024
DMNER: Biomedical Entity Recognition by Detection and Matching Junyi Bian Rongze Jiang W. Zhai Tianyang Huang Hong Zhou Shanfeng Zhu 32 2 0 27 Jun 2023
Pre-training Multi-task Contrastive Learning Models for Scientific Literature Understanding Yu Zhang Hao Cheng Zhihong Shen Xiaodong Liu Yejiang Wang Jianfeng Gao 32 14 0 23 May 2023
A Biomedical Entity Extraction Pipeline for Oncology Health Records in Portuguese Hugo Sousa Arian Pasquali A. Jorge Catarina Sousa Santos Mário Amorim Lopes 28 1 0 18 Apr 2023
A Comparative Study of Pretrained Language Models for Long Clinical Text Yikuan Li R. M. Wehbe F. Ahmad Hanyin Wang Yuan Luo LM&MA ELM VLM MedIm 29 79 0 27 Jan 2023
AIONER: All-in-one scheme-based biomedical named entity recognition using deep learning Ling Luo Chih-Hsuan Wei Po-Ting Lai Robert Leaman Qingyu Chen Zhiyong Lu 25 29 0 30 Nov 2022
AF Adapter: Continual Pretraining for Building Chinese Biomedical Language Model Yongyu Yan Kui Xue Xiaoming Shi Qi Ye Jingping Liu Tong Ruan CLL 47 1 0 21 Nov 2022
Clinical-Longformer and Clinical-BigBird: Transformers for long clinical sequences Yikuan Li R. M. Wehbe F. Ahmad Hanyin Wang Yuan Luo VLM MedIm 150 86 0 27 Jan 2022
Razmecheno: Named Entity Recognition from Digital Archive of Diaries "Prozhito" Timofey Atnashev V. Ganeeva Roman S. Kazakov Daria Matyash Michael Sonkin E. Voloshina O. Serikov Ekaterina Artemova 19 2 0 24 Jan 2022
A Multi-modal Fusion Framework Based on Multi-task Correlation Learning for Cancer Prognosis Prediction Kaiwen Tan Weixian Huang Xiaofeng Liu Jinlong Hu Shoubin Dong 21 42 0 22 Jan 2022
Semantics-Preserved Distortion for Personal Privacy Protection in Information Management Jiajia Li Peijie Wang Letian Peng Shitou Zhang Xueyi Li Zuchao Li Haihui Zhao 29 1 0 04 Jan 2022
Few-shot Named Entity Recognition with Cloze Questions V. Gatta V. Moscato Marco Postiglione Giancarlo Sperlí 27 4 0 24 Nov 2021
Clinical Named Entity Recognition using Contextualized Token Representations Yichao Zhou C. Ju J. H. Caufield Kevin J. Shih Calvin Yu‐Chian Chen Yizhou Sun Kai-Wei Chang Peipei Ping Wei Wang 37 10 0 23 Jun 2021
PharmKE: Knowledge Extraction Platform for Pharmaceutical Texts using Transfer Learning Nasi Jofche Kostadin Mishev Riste Stojanov Milos Jovanovik D. Trajanov 22 17 0 25 Feb 2021
Spark NLP: Natural Language Understanding at Scale Veysel Kocaman D. Talby 45 66 0 26 Jan 2021
How Do Your Biomedical Named Entity Recognition Models Generalize to Novel Entities? Hyunjae Kim Jaewoo Kang AI4CE 86 21 0 01 Jan 2021
Biomedical Named Entity Recognition at Scale Veysel Kocaman D. Talby 25 67 0 12 Nov 2020
Disease Normalization with Graph Embeddings D. Pujary C. Thorne Wilker Aziz MedIm AI4CE 28 8 0 24 Oct 2020
Multi-domain Clinical Natural Language Processing with MedCAT: the Medical Concept Annotation Toolkit Z. Kraljevic Thomas Searle Anthony Shek Lukasz Roguski Kawsar Noor ... A. Shah W. K. Wong Zina M. Ibrahim J. Teo Richard J. B. Dobson AI4MH 33 162 0 02 Oct 2020
Biomedical named entity recognition using BERT in the machine reading comprehension framework Cong Sun Zhihao Yang Lei Wang Yin Zhang Hongfei Lin Jian Wang 15 93 0 03 Sep 2020
Learning Boost by Exploiting the Auxiliary Task in Multi-task Domain Jonghwa Yim Sang Hwan Kim 21 2 0 05 Aug 2020
A Deep Learning Pipeline for Patient Diagnosis Prediction Using Electronic Health Records Leopold Franz Yash Raj Shrestha B. Paudel OOD 23 25 0 23 Jun 2020
DeepVar: An End-to-End Deep Learning Approach for Genomic Variant Recognition in Biomedical Literature Chaoran Cheng Fei Tan Zhi Wei 23 7 0 05 Jun 2020
An Empirical Study of Multi-Task Learning on BERT for Biomedical Text Mining Yifan Peng Qingyu Chen Zhiyong Lu 8 112 0 06 May 2020
MT-Clinical BERT: Scaling Clinical Information Extraction with Multitask Learning Andriy Mulyar Bridget T. McInnes 16 52 0 21 Apr 2020
Knowledge Guided Named Entity Recognition for BioMedical Text Pratyay Banerjee Kuntal Kumar Pal M. Devarakonda Chitta Baral 24 0 0 10 Nov 2019
Progress Notes Classification and Keyword Extraction using Attention-based Deep Learning Models with BERT Matthew Tang P. Gandhi Md. Ahsanul Kabir C. Zou J. Blakey Xiao Luo 30 38 0 13 Oct 2019
A Survey on Deep Learning for Named Entity Recognition J. Li Aixin Sun Jianglei Han Chenliang Li 3DV 22 1,139 0 22 Dec 2018
A Neural Multi-Task Learning Framework to Jointly Model Medical Named Entity Recognition and Normalization Sendong Zhao Ting Liu Sicheng Zhao Fei Wang MedIm 18 113 0 14 Dec 2018
Effective Use of Bidirectional Language Modeling for Transfer Learning in Biomedical Named Entity Recognition Devendra Singh Sachan P. Xie Mrinmaya Sachan Eric Xing MedIm 27 56 0 21 Nov 2017