Interactive Medical Image Segmentation using Deep Learning with Image-specific Fine-tuning

11 October 2017

Guotai Wang

Sebastien Ourselin

Tom Kamiel Magda Vercauteren

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Papers citing "Interactive Medical Image Segmentation using Deep Learning with Image-specific Fine-tuning"

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Title
A Lightweight and Extensible Cell Segmentation and Classification Model for Whole Slide Images N. Shvetsov T. Kilvaer M. Tafavvoghi Anders Sildnes Kajsa Møllersen Lill-ToveRasmussen Busund L. A. Bongo VLM 71 1 0 26 Feb 2025
A review of uncertainty quantification in medical image analysis: probabilistic and non-probabilistic methods Ling Huang S. Ruan Yucheng Xing Mengling Feng 41 20 0 09 Oct 2023
Single-Image-Based Deep Learning for Segmentation of Early Esophageal Cancer Lesions Haipeng Li Di Liu Yunzhi Zeng Shuaicheng Liu Tao Gan N. Rao Jin-lin Yang Bing Zeng 24 6 0 09 Jun 2023
DeepEdit: Deep Editable Learning for Interactive Segmentation of 3D Medical Images A. Diaz-Pinto P. Mehta Sachidanand Alle Muhammad Asad Richard Brown ... Tom Kamiel Magda Vercauteren Andrew Feng Abood Quraini Sebastien Ourselin M. Jorge Cardoso MedIm 27 19 0 18 May 2023
Parameter-Efficient Fine-Tuning for Medical Image Analysis: The Missed Opportunity Raman Dutt Linus Ericsson Pedro Sanchez Sotirios A. Tsaftaris Timothy M. Hospedales MedIm 27 50 0 14 May 2023
Technical Understanding from IML Hands-on Experience: A Study through a Public Event for Science Museum Visitors Wataru Kawabe Yuri Nakao Akihisa Shitara Yusuke Sugano 26 1 0 10 May 2023
Point-supervised Single-cell Segmentation via Collaborative Knowledge Sharing Ji Yu 24 5 0 20 Apr 2023
How Will It Drape Like? Capturing Fabric Mechanics from Depth Images Carlos Rodriguez-Pardo Melania Prieto-Martin Dan Casas Elena Garces 31 12 0 13 Apr 2023
Collective Intelligent Strategy for Improved Segmentation of COVID-19 from CT S. Das Sushmita Mitra B. Uma Shankar 12 3 0 23 Dec 2022
SpaceEditing: Integrating Human Knowledge into Deep Neural Networks via Interactive Latent Space Editing Jiafu Wei Ding Xia H. Xie Chia-Ming Chang Chuntao Li Xi Yang KELM 32 1 0 08 Dec 2022
RetiFluidNet: A Self-Adaptive and Multi-Attention Deep Convolutional Network for Retinal OCT Fluid Segmentation Reza Rasti Armin Biglari Mohammad Rezapourian Ziyun Yang Sina Farsiu 37 30 0 26 Sep 2022
Morphology-Aware Interactive Keypoint Estimation Jinhee Kim Taesung Kim Taewoo Kim Jaegul Choo Dong-Wook Kim Byung-Uk Ahn In-Seok Song Yoon-Ji Kim MedIm 33 3 0 15 Sep 2022
Wound Segmentation with Dynamic Illumination Correction and Dual-view Semantic Fusion Honghui Liu Changjian Wang Kele Xu Fangzhao Li Ming Feng Yuxing Peng Hongjun He 3DV 22 0 0 12 Jul 2022
DLTTA: Dynamic Learning Rate for Test-time Adaptation on Cross-domain Medical Images Hongzheng Yang Cheng Chen Meirui Jiang Quande Liu Jianfeng Cao Pheng Ann Heng Qi Dou OOD 40 26 0 27 May 2022
A dataset of ant colonies motion trajectories in indoor and outdoor scenes for social cluster behavior study Mei-Yi Wu X. Cao Xiaoyu Cao Shihui Guo 11 2 0 09 Apr 2022
Generating 3D Bio-Printable Patches Using Wound Segmentation and Reconstruction to Treat Diabetic Foot Ulcers H. Chae Seunghwan Lee H. Son Seungjae Han T. Lim MedIm 30 3 0 08 Mar 2022
BoostMIS: Boosting Medical Image Semi-supervised Learning with Adaptive Pseudo Labeling and Informative Active Annotation Wenqiao Zhang Lei Zhu James Hallinan A. Makmur Shengyu Zhang Qingpeng Cai Beng Chin Ooi 30 79 0 04 Mar 2022
Interactive Medical Image Segmentation with Self-Adaptive Confidence Calibration Wenhao Li Qisen Xu Chuyun Shen Bin Hu Fengping Zhu Yuxin Li Bo Jin Xiangfeng Wang 30 5 0 15 Nov 2021
Interactive Segmentation via Deep Learning and B-Spline Explicit Active Surfaces Helena Williams J. Pedrosa L. Cattani S. Housmans Tom Kamiel Magda Vercauteren Jan Deprest Jan D'hooge 16 7 0 25 Oct 2021
Dual Shape Guided Segmentation Network for Organs-at-Risk in Head and Neck CT Images Shuai Wang T. Yanagihara B. Chera Colette J. Shen Daniel Pastor J. Lian 27 0 0 23 Oct 2021
Weakly Supervised Few-Shot Segmentation Via Meta-Learning P. H. T. Gama Hugo Oliveira J. M. Junior J. D. Santos VLM 27 19 0 03 Sep 2021
MitoVis: A Visually-guided Interactive Intelligent System for Neuronal Mitochondria Analysis Junyoung Choi Hak-jae Lee Suyeon Kim Seok-Kyu Kwon Won-Ki Jeong 16 3 0 03 Sep 2021
Robust Interactive Semantic Segmentation of Pathology Images with Minimal User Input Mostafa Jahanifar Neda Zamani Tajeddin Navid Alemi Koohbanani Nasir M. Rajpoot 29 22 0 30 Aug 2021
Efficient and Generic Interactive Segmentation Framework to Correct Mispredictions during Clinical Evaluation of Medical Images Bhavani Sambaturu Ashutosh Gupta C. V. Jawahar Chetan Arora MedIm 39 3 0 06 Aug 2021
Inter Extreme Points Geodesics for End-to-End Weakly Supervised Image Segmentation R. Dorent Samuel Joutard J. Shapey A. Kujawa Marc Modat Sebastien Ourselin Tom Kamiel Magda Vercauteren 18 28 0 01 Jul 2021
Quality-Aware Memory Network for Interactive Volumetric Image Segmentation Tianfei Zhou Liulei Li G. Bredell Jianwu Li E. Konukoglu 27 14 0 20 Jun 2021
AngularGrad: A New Optimization Technique for Angular Convergence of Convolutional Neural Networks S. K. Roy Mercedes Eugenia Paoletti J. Haut S. Dubey Purushottam Kar A. Plaza B. B. Chaudhuri ODL 24 18 0 21 May 2021
LAFEAT: Piercing Through Adversarial Defenses with Latent Features Yunrui Yu Xitong Gao Chengzhong Xu AAML FedML 33 44 0 19 Apr 2021
NFCNN: Toward a Noise Fusion Convolutional Neural Network for Image Denoising Maoyuan Xu Xiaoping Xie 26 14 0 17 Feb 2021
High Fidelity Interactive Video Segmentation Using Tensor Decomposition Boundary Loss Convolutional Tessellations and Context Aware Skip Connections A. Rhodes Manan Goel VOS 19 2 0 23 Nov 2020
U-Net and its variants for medical image segmentation: theory and applications N. Siddique Sidike Paheding Colin P. Elkin Vijay Devabhaktuni SSeg 25 1,041 0 02 Nov 2020
Medical Image Segmentation Using Deep Learning: A Survey Risheng Wang Tao Lei Xiaogang Du Yong Wan Hongying Meng A. Nandi SSeg OOD 33 544 0 28 Sep 2020
CA-Net: Comprehensive Attention Convolutional Neural Networks for Explainable Medical Image Segmentation Ran Gu Guotai Wang Tao Song Rui Huang Michael Aertsen Jan Deprest Sébastien Ourselin Tom Kamiel Magda Vercauteren Shaoting Zhang SSeg 25 457 0 22 Sep 2020
Semi-supervised Medical Image Segmentation through Dual-task Consistency Xiangde Luo Jieneng Chen Tao Song Yinan Chen Guotai Wang Shaoting Zhang 24 520 0 09 Sep 2020
User-Guided Domain Adaptation for Rapid Annotation from User Interactions: A Study on Pathological Liver Segmentation Ashwin Raju Zhanghexuan Ji Chi-Tung Cheng Jinzheng Cai Junzhou Huang Jing Xiao Le Lu Chien-Hung Liao Adam P. Harrison 36 13 0 05 Sep 2020
Uncertainty-Guided Efficient Interactive Refinement of Fetal Brain Segmentation from Stacks of MRI Slices Guotai Wang Michael Aertsen Jan Deprest Sebastien Ourselin Tom Kamiel Magda Vercauteren Shaoting Zhang 31 34 0 02 Jul 2020
NuClick: A Deep Learning Framework for Interactive Segmentation of Microscopy Images Navid Alemi Koohbanani Mostafa Jahanifar Neda Zamani Tajadin Nasir M. Rajpoot 19 121 0 29 May 2020
Hybrid Attention for Automatic Segmentation of Whole Fetal Head in Prenatal Ultrasound Volumes Xin Yang Xu Wang Yi Wang Haoran Dou Shengli Li H. Wen Yi Lin Pheng-Ann Heng Dong Ni 16 19 0 28 Apr 2020
Test-Time Adaptable Neural Networks for Robust Medical Image Segmentation Neerav Karani Ertunc Erdil K. Chaitanya E. Konukoglu OOD 23 162 0 09 Apr 2020
Weakly supervised segmentation from extreme points H. Roth Ling Zhang Dong Yang Fausto Milletari Ziyue Xu Xiaosong Wang Daguang Xu 40 21 0 02 Oct 2019
Embracing Imperfect Datasets: A Review of Deep Learning Solutions for Medical Image Segmentation Nima Tajbakhsh Laura Jeyaseelan Q. Li J. Chiang Zhihao Wu Xiaowei Ding 31 751 0 27 Aug 2019
Hyper Vision Net: Kidney Tumor Segmentation Using Coordinate Convolutional Layer and Attention Unit D.Sabarinathan M.Parisa Beham S. M. M. Roomi MedIm 16 18 0 09 Aug 2019
Machine Learning at the Network Edge: A Survey M. G. Sarwar Murshed Chris Murphy Daqing Hou Nazar Khan Ganesh Ananthanarayanan Faraz Hussain 38 378 0 31 Jul 2019
Reducing the Hausdorff Distance in Medical Image Segmentation with Convolutional Neural Networks Davood Karimi Septimiu E. Salcudean MedIm 37 391 0 22 Apr 2019
A Volumetric Convolutional Neural Network for Brain Tumor Segmentation Ryan Sherman 21 4 0 27 Oct 2018
Automatic Brain Tumor Segmentation using Convolutional Neural Networks with Test-Time Augmentation Guotai Wang Wenqi Li Sebastien Ourselin Tom Kamiel Magda Vercauteren 14 151 0 18 Oct 2018
Aleatoric uncertainty estimation with test-time augmentation for medical image segmentation with convolutional neural networks Guotai Wang Wenqi Li Michael Aertsen Jan Deprest Sebastien Ourselin Tom Kamiel Magda Vercauteren UQCV MedIm OOD 49 582 0 19 Jul 2018
Weakly-Supervised Convolutional Neural Networks for Multimodal Image Registration Yipeng Hu Marc Modat Eli Gibson Wenqi Li N. Ghavami ... M. Emberton Sébastien Ourselin J. A. Noble D. Barratt Tom Kamiel Magda Vercauteren 45 381 0 09 Jul 2018
Crossbar-Net: A Novel Convolutional Network for Kidney Tumor Segmentation in CT Images Qian Yu Yinghuan Shi Jinquan Sun Yang Gao Yakang Dai Jianbing Zhu 24 97 0 27 Apr 2018
Quantifying Uncertainty in Discrete-Continuous and Skewed Data with Bayesian Deep Learning T. Vandal E. Kodra Jennifer Dy S. Ganguly R. Nemani A. Ganguly UQCV BDL 27 52 0 13 Feb 2018