Leveraging Vision-Language Embeddings for Zero-Shot Learning in Histopathology Images

Zero-shot learning holds tremendous potential for histopathology image analysis by enabling models to generalize to unseen classes without extensive labeled data. Recent advancements in vision-language models (VLMs) have expanded the capabilities of ZSL, allowing models to perform tasks without task-specific fine-tuning. However, applying VLMs to histopathology presents considerable challenges due to the complexity of histopathological imagery and the nuanced nature of diagnostic tasks. In this paper, we propose a novel framework called Multi-Resolution Prompt-guided Hybrid Embedding (MR-PHE) to address these challenges in zero-shot histopathology image classification. MR-PHE leverages multiresolution patch extraction to mimic the diagnostic workflow of pathologists, capturing both fine-grained cellular details and broader tissue structures critical for accurate diagnosis. We introduce a hybrid embedding strategy that integrates global image embeddings with weighted patch embeddings, effectively combining local and global contextual information. Additionally, we develop a comprehensive prompt generation and selection framework, enriching class descriptions with domain-specific synonyms and clinically relevant features to enhance semantic understanding. A similarity-based patch weighting mechanism assigns attention-like weights to patches based on their relevance to class embeddings, emphasizing diagnostically important regions during classification. Our approach utilizes pretrained VLM, CONCH for ZSL without requiring domain-specific fine-tuning, offering scalability and reducing dependence on large annotated datasets. Experimental results demonstrate that MR-PHE not only significantly improves zero-shot classification performance on histopathology datasets but also often surpasses fully supervised models.

@article{rahaman2025_2503.10731,
  title={ Leveraging Vision-Language Embeddings for Zero-Shot Learning in Histopathology Images },
  author={ Md Mamunur Rahaman and Ewan K. A. Millar and Erik Meijering },
  journal={arXiv preprint arXiv:2503.10731},
  year={ 2025 }
}