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Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes

1 September 2023
Sunjun Kweon
Junu Kim
Jiyoun Kim
Sujeong Im
Eunbyeol Cho
Seongsu Bae
Jungwoo Oh
Gyubok Lee
Jong Hak Moon
S. C. You
Seungjin Baek
Chang Hoon Han
Yoon Bin Jung
Yohan Jo
Edward Choi
    LM&MAELM
ArXiv (abs)PDFHTMLGithub (106★)
Abstract

The development of large language models tailored for handling patients' clinical notes is often hindered by the limited accessibility and usability of these notes due to strict privacy regulations. To address these challenges, we first create synthetic large-scale clinical notes using publicly available case reports extracted from biomedical literature. We then use these synthetic notes to train our specialized clinical large language model, Asclepius. While Asclepius is trained on synthetic data, we assess its potential performance in real-world applications by evaluating it using real clinical notes. We benchmark Asclepius against several other large language models, including GPT-3.5-turbo and other open-source alternatives. To further validate our approach using synthetic notes, we also compare Asclepius with its variants trained on real clinical notes. Our findings convincingly demonstrate that synthetic clinical notes can serve as viable substitutes for real ones when constructing high-performing clinical language models. This conclusion is supported by detailed evaluations conducted by both GPT-4 and medical professionals. All resources including weights, codes, and data used in the development of Asclepius are made publicly accessible for future research.

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