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UncertaINR: Uncertainty Quantification of End-to-End Implicit Neural Representations for Computed Tomography

22 February 2022
Francisca Vasconcelos
Bobby He
Nalini Singh
Yee Whye Teh
    BDL
    OOD
    UQCV
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Abstract

Implicit neural representations (INRs) have achieved impressive results for scene reconstruction and computer graphics, where their performance has primarily been assessed on reconstruction accuracy. As INRs make their way into other domains, where model predictions inform high-stakes decision-making, uncertainty quantification of INR inference is becoming critical. To that end, we study a Bayesian reformulation of INRs, UncertaINR, in the context of computed tomography, and evaluate several Bayesian deep learning implementations in terms of accuracy and calibration. We find that they achieve well-calibrated uncertainty, while retaining accuracy competitive with other classical, INR-based, and CNN-based reconstruction techniques. Contrary to common intuition in the Bayesian deep learning literature, we find that INRs obtain the best calibration with computationally efficient Monte Carlo dropout, outperforming Hamiltonian Monte Carlo and deep ensembles. Moreover, in contrast to the best-performing prior approaches, UncertaINR does not require a large training dataset, but only a handful of validation images.

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