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Parallel Wavelet Tree Construction

Abstract

We present parallel algorithms for wavelet tree construction with polylogarithmic depth, improving upon the linear depth of the recent parallel algorithms by Fuentes-Sepulveda et al. We experimentally show that on a 40-core machine with two-way hyper-threading, we outperform the existing parallel algorithms by 1.3--5.6x and achieve up to 27x speedup over the sequential algorithm on a variety of real-world and artificial inputs. Our algorithms show good scalability with increasing thread count, input size and alphabet size. We also discuss extensions to variants of the standard wavelet tree.

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